CCMB
Information Technology Resource @ BIC

Scientific Application Tools

Packages & Tools
BLAST
CLUSTALW
EMBOSS
Phylip
Repeat Masker
Phrap
SIFT
Polyphen
Mfold
MEME
MIRANDA
Sigma Plot 9.0
Discovery Studio Modeling
SPSS 11.0
Reference Manager 11.0.1
MATLAB
Avadis

Databases Available
nt, nr, swissprot, PDB, EST, human genome (chromosome-wise), chimp genome, mouse genome etc. for BLAST.
PBD structures.
Human Genome, Chimp genome, cattle genome.
DSSP (Dictionary of Secondary Structure of Proteins).
Non-redundant databases of nucleic acid and protein sequences and translated protein sequences.
GeneCards.
Protein and Molecular Biology Protocols CD’s.
CCMB Microarray clone Anotation Systems.
Proteomics Database and Integrated Data mining Module for CCMB Glioma Proteomics.